Package: cellOrigins
Type: Package
Title: Finds RNASeq Source Tissues Using In Situ Hybridisation Data
Version: 0.1.3
Author: David Molnar
Maintainer: David Molnar <dmolnar100@icloud.com>
Description: Finds the most likely originating tissue(s) and
        developmental stage(s) of tissue-specific RNA sequencing data.
        The package identifies both pure transcriptomes and mixtures of
        transcriptomes. The most likely identity is found through
        comparisons of the sequencing data with high-throughput in situ
        hybridisation patterns. Typical uses are the identification of
        cancer cell origins, validation of cell culture strain
        identities, validation of single-cell transcriptomes, and
        validation of identity and purity of flow-sorting and
        dissection sequencing products.
License: CC BY-NC-SA 4.0
Encoding: UTF-8
LazyData: true
Imports: iterpc
NeedsCompilation: no
Packaged: 2026-07-14 08:43:27 UTC; root
Config/pak/sysreqs: libgmp3-dev
Repository: https://davidhmolnar.r-universe.dev
Date/Publication: 2020-06-05 08:00:02 UTC
RemoteUrl: https://github.com/cran/cellOrigins
RemoteRef: HEAD
RemoteSha: 13b80ca5a552a8415bd104da0d5a32c810202599